Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.41■□□□□ 0.54
Col15a1O35206 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Col15a1O35206 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Col15a1O35206 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.41■□□□□ 0.54
Col15a1O35206 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.41■□□□□ 0.54
Col15a1O35206 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col15a1O35206 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col15a1O35206 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.4■□□□□ 0.54
Col15a1O35206 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.4■□□□□ 0.54
Col15a1O35206 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Gm11524-201ENSMUST00000119349 807 ntBASIC18.4■□□□□ 0.54
Col15a1O35206 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Gm7561-201ENSMUST00000211203 886 ntBASIC18.4■□□□□ 0.54
Col15a1O35206 Gm18027-201ENSMUST00000218947 619 ntBASIC18.4■□□□□ 0.54
Col15a1O35206 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Col15a1O35206 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col15a1O35206 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col15a1O35206 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.39■□□□□ 0.54
Col15a1O35206 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col15a1O35206 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col15a1O35206 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Col15a1O35206 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col15a1O35206 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col15a1O35206 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.39■□□□□ 0.53
Col15a1O35206 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Gm8652-201ENSMUST00000181363 964 ntBASIC18.39■□□□□ 0.53
Col15a1O35206 Gm7287-201ENSMUST00000205267 602 ntBASIC18.39■□□□□ 0.53
Col15a1O35206 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Col15a1O35206 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col15a1O35206 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.39■□□□□ 0.53
Col15a1O35206 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col15a1O35206 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Gm15429-201ENSMUST00000151268 798 ntBASIC18.38■□□□□ 0.53
Col15a1O35206 Gm26464-201ENSMUST00000157094 305 ntBASIC18.38■□□□□ 0.53
Col15a1O35206 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col15a1O35206 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.38■□□□□ 0.53
Col15a1O35206 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Col15a1O35206 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.38■□□□□ 0.53
Col15a1O35206 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.38■□□□□ 0.53
Col15a1O35206 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Col15a1O35206 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col15a1O35206 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col15a1O35206 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Col15a1O35206 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col15a1O35206 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col15a1O35206 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Col15a1O35206 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col15a1O35206 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms