Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa8J3QNX5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Gm27357-201ENSMUST00000183754 135 ntBASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shisa8J3QNX5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa8J3QNX5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms