Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Gm1401-201ENSMUST00000122048 772 ntBASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh9F8VPK8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Gm9182-201ENSMUST00000217829 639 ntBASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh9F8VPK8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Gm14140-201ENSMUST00000119999 995 ntBASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Thap2-203ENSMUST00000218989 527 ntBASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Psmb5-202ENSMUST00000227257 622 ntBASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdh9F8VPK8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh9F8VPK8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms