Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cpsf4lE9Q2N0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cpsf4lE9Q2N0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cpsf4lE9Q2N0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4lE9Q2N0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4lE9Q2N0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4lE9Q2N0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4lE9Q2N0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4lE9Q2N0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cpsf4lE9Q2N0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cpsf4lE9Q2N0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Gm25287-201ENSMUST00000103846 110 ntBASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Gm22918-201ENSMUST00000103855 110 ntBASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cpsf4lE9Q2N0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms