Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Syt7-205ENSMUST00000224135 1557 ntBASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Srp54bE9PXC0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.28□□□□□ -0.12
Srp54bE9PXC0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Gm44855-201ENSMUST00000205725 362 ntBASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Gm45453-201ENSMUST00000211758 853 ntBASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.28□□□□□ -0.12
Srp54bE9PXC0 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Srp54bE9PXC0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Srp54bE9PXC0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Gm7488-201ENSMUST00000117148 684 ntBASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Gm5745-201ENSMUST00000183748 313 ntBASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Srp54bE9PXC0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms