Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Gm42471-201ENSMUST00000201457 1865 ntBASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Gm22331-201ENSMUST00000158066 136 ntBASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 AC166997.1-201ENSMUST00000225122 572 ntBASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hfm1D3Z4R1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Gm38223-201ENSMUST00000194484 695 ntBASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Gm43818-201ENSMUST00000200605 466 ntBASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC20.04■□□□□ 0.8
Hfm1D3Z4R1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Gm38241-201ENSMUST00000192641 898 ntBASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Gm19184-201ENSMUST00000196798 928 ntBASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Gm43118-201ENSMUST00000199149 775 ntBASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC20.03■□□□□ 0.8
Hfm1D3Z4R1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Gm8810-201ENSMUST00000172895 754 ntBASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Gm27331-201ENSMUST00000183705 60 ntBASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Gm19309-201ENSMUST00000218295 205 ntBASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Mir497b-201ENSMUST00000093601 125 ntBASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms