Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gm12441-201ENSMUST00000121806 588 ntBASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gm9172-201ENSMUST00000212092 954 ntBASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ccnb1ip1D3Z3K2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gm715-201ENSMUST00000117865 831 ntBASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccnb1ip1D3Z3K2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccnb1ip1D3Z3K2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms