Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Mir1894-201ENSMUST00000122802 81 ntBASIC12.99□□□□□ -0.33
Shank1D3YZU1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Gm10766-202ENSMUST00000194123 606 ntBASIC12.99□□□□□ -0.33
Shank1D3YZU1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Mir125a-201ENSMUST00000083545 68 ntBASIC12.99□□□□□ -0.33
Shank1D3YZU1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shank1D3YZU1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shank1D3YZU1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Gm27892-201ENSMUST00000185017 106 ntBASIC12.98□□□□□ -0.33
Shank1D3YZU1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.98□□□□□ -0.33
Shank1D3YZU1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.98□□□□□ -0.33
Shank1D3YZU1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.98□□□□□ -0.33
Shank1D3YZU1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shank1D3YZU1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm12390-201ENSMUST00000117897 397 ntBASIC12.97□□□□□ -0.33
Shank1D3YZU1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm5356-201ENSMUST00000093326 615 ntBASIC12.97□□□□□ -0.33
Shank1D3YZU1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.97□□□□□ -0.33
Shank1D3YZU1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.97□□□□□ -0.33
Shank1D3YZU1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm45098-201ENSMUST00000207179 657 ntBASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm45331-201ENSMUST00000209868 554 ntBASIC12.97□□□□□ -0.33
Shank1D3YZU1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms