Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a3A2ACT7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Gm5354-201ENSMUST00000182417 973 ntBASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Gm43630-201ENSMUST00000201550 776 ntBASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col9a3A2ACT7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.08□□□□□ -0.16
Col9a3A2ACT7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Gm9002-201ENSMUST00000178437 499 ntBASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Gm9899-201ENSMUST00000065519 555 ntBASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a3A2ACT7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Gm27701-201ENSMUST00000184498 110 ntBASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a3A2ACT7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms