Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc112A0AUP1 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.58■□□□□ 0.25
Ccdc112A0AUP1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ccdc112A0AUP1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ccdc112A0AUP1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc112A0AUP1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.58■□□□□ 0.25
Ccdc112A0AUP1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Gm16198-201ENSMUST00000118766 670 ntBASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Mir5131-201ENSMUST00000175426 93 ntBASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Gm10154-201ENSMUST00000084445 354 ntBASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc112A0AUP1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc112A0AUP1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.56■□□□□ 0.24
Ccdc112A0AUP1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms