Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Ank2-226ENSMUST00000189368 339 ntBASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Rps4l-201ENSMUST00000071745 943 ntBASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trbv29A0A0G2LB96 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Gm15173-201ENSMUST00000122049 433 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Gm4899-201ENSMUST00000178708 719 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Gm28033-201ENSMUST00000184224 96 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Gm27459-201ENSMUST00000184860 107 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv29A0A0G2LB96 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Gm34391-201ENSMUST00000203706 907 ntBASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Olfr286-202ENSMUST00000205305 969 ntBASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trbv29A0A0G2LB96 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms