Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm9726-201ENSMUST00000180321 678 ntBASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm2272-201ENSMUST00000194903 582 ntBASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm9727-201ENSMUST00000161387 555 ntBASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm27301-201ENSMUST00000184012 127 ntBASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9n-2A0A0G2JDP3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms