Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm33142-201ENSMUST00000193913 867 ntBASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm11780-201ENSMUST00000136880 516 ntBASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms