Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav7n-4A0A075B620 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav7n-4A0A075B620 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Gm13559-201ENSMUST00000120476 863 ntBASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav7n-4A0A075B620 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms