Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn9Q9Z0S7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Gm18206-201ENSMUST00000207027 926 ntBASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn9Q9Z0S7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn9Q9Z0S7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Gm15483-201ENSMUST00000120338 456 ntBASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Gm5479-201ENSMUST00000160578 435 ntBASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Rpph1-201ENSMUST00000175096 319 ntBASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Mir3113-201ENSMUST00000175478 76 ntBASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn9Q9Z0S7 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms