Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lhx9Q9WUH2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm13453-201ENSMUST00000118708 357 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm12151-201ENSMUST00000121374 290 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm27306-201ENSMUST00000183970 107 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm29541-201ENSMUST00000191351 678 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm38294-201ENSMUST00000192831 381 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm37230-201ENSMUST00000194491 818 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lhx9Q9WUH2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Gm25144-201ENSMUST00000179561 110 ntBASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Gm25352-201ENSMUST00000179815 110 ntBASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Gm6888-201ENSMUST00000221983 706 ntBASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lhx9Q9WUH2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx9Q9WUH2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx9Q9WUH2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.79□□□□□ -0.2
Lhx9Q9WUH2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms