Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm16026-204ENSMUST00000162652 683 ntBASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Gm17271-201ENSMUST00000165535 355 ntBASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ClcnkaQ9WUB7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClcnkaQ9WUB7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
ClcnkaQ9WUB7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
ClcnkaQ9WUB7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
ClcnkaQ9WUB7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
ClcnkaQ9WUB7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms