Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Gm2651-201ENSMUST00000203560 838 ntBASIC14.17□□□□□ -0.14
Cdh17Q9R100 Gm9182-201ENSMUST00000217829 639 ntBASIC14.17□□□□□ -0.14
Cdh17Q9R100 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh17Q9R100 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Gm37230-201ENSMUST00000194491 818 ntBASIC14.16□□□□□ -0.14
Cdh17Q9R100 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.16□□□□□ -0.14
Cdh17Q9R100 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.16□□□□□ -0.14
Cdh17Q9R100 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.16□□□□□ -0.14
Cdh17Q9R100 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh17Q9R100 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh17Q9R100 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms