Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm13884-201ENSMUST00000118103 829 ntBASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chaf1aQ9QWF0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Gm10060-201ENSMUST00000212002 111 ntBASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Rubie-203ENSMUST00000227803 2430 ntBASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1aQ9QWF0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Gm11764-201ENSMUST00000120221 623 ntBASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1aQ9QWF0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Mir8098-201ENSMUST00000184011 137 ntBASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1aQ9QWF0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms