Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ube4bQ9ES00 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ube4bQ9ES00 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ube4bQ9ES00 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube4bQ9ES00 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Ube4bQ9ES00 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14□□□□□ -0.17
Ube4bQ9ES00 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ube4bQ9ES00 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube4bQ9ES00 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4bQ9ES00 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4bQ9ES00 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms