Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Gm23547-201ENSMUST00000158210 271 ntBASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4cQ9D7F7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4cQ9D7F7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp4cQ9D7F7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp4cQ9D7F7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chmp4cQ9D7F7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Mzt1-203ENSMUST00000227948 952 ntBASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4cQ9D7F7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms