Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chaf1bQ9D0N7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Gm12644-201ENSMUST00000119935 606 ntBASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chaf1bQ9D0N7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Gm7284-201ENSMUST00000131667 944 ntBASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chaf1bQ9D0N7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Gm15372-201ENSMUST00000120729 834 ntBASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Gm12895-201ENSMUST00000122214 226 ntBASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chaf1bQ9D0N7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms