Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RTRAFQ9CQE8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Gm13559-201ENSMUST00000120476 863 ntBASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RTRAFQ9CQE8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Gm22697-201ENSMUST00000175194 63 ntBASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Gm18101-201ENSMUST00000215769 548 ntBASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RTRAFQ9CQE8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms