Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Gm7153-201ENSMUST00000117092 455 ntBASIC13.75□□□□□ -0.21
Ska1Q9CPV1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.75□□□□□ -0.21
Ska1Q9CPV1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ska1Q9CPV1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Gm11764-201ENSMUST00000120221 623 ntBASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Gm7230-201ENSMUST00000173026 815 ntBASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.74□□□□□ -0.21
Ska1Q9CPV1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.74□□□□□ -0.21
Ska1Q9CPV1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Gm9682-201ENSMUST00000197505 556 ntBASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ska1Q9CPV1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ska1Q9CPV1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms