Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim16Q99PP9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim16Q99PP9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Celf4-206ENSMUST00000224553 1729 ntBASIC14.24□□□□□ -0.13
Trim16Q99PP9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim16Q99PP9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.23□□□□□ -0.13
Trim16Q99PP9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.23□□□□□ -0.13
Trim16Q99PP9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.23□□□□□ -0.13
Trim16Q99PP9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.23□□□□□ -0.13
Trim16Q99PP9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim16Q99PP9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.22□□□□□ -0.13
Trim16Q99PP9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim16Q99PP9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms