Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Gm11452-201ENSMUST00000122376 690 ntBASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Mzt1-203ENSMUST00000227948 952 ntBASIC14.26□□□□□ -0.13
Trim8Q99PJ2 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim8Q99PJ2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.25□□□□□ -0.13
Trim8Q99PJ2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.25□□□□□ -0.13
Trim8Q99PJ2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim8Q99PJ2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim8Q99PJ2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms