Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gm18905-201ENSMUST00000205454 928 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gm5161-201ENSMUST00000075243 853 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.55□□□□□ -0.08
Cdh23Q99PF4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh23Q99PF4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Gm14263-201ENSMUST00000117955 746 ntBASIC14.54□□□□□ -0.08
Cdh23Q99PF4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Gm26464-201ENSMUST00000157094 305 ntBASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Gm11803-201ENSMUST00000119966 444 ntBASIC14.54□□□□□ -0.08
Cdh23Q99PF4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Gm37986-201ENSMUST00000193285 383 ntBASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Gm38671-201ENSMUST00000200573 130 ntBASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdh23Q99PF4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Gm13216-201ENSMUST00000117145 591 ntBASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Gm43947-201ENSMUST00000203019 959 ntBASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh23Q99PF4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh23Q99PF4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh23Q99PF4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms