Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Gm13464-201ENSMUST00000119418 935 ntBASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.97□□□□□ -0.33
Thumpd1Q99J36 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Thumpd1Q99J36 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Gm13836-201ENSMUST00000121159 501 ntBASIC12.96□□□□□ -0.33
Thumpd1Q99J36 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Thumpd1Q99J36 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Thumpd1Q99J36 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd1Q99J36 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd1Q99J36 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd1Q99J36 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Thumpd1Q99J36 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Thumpd1Q99J36 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms