Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.13■□□□□ 0.33
Col20a1Q923P0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.13■□□□□ 0.33
Col20a1Q923P0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.13■□□□□ 0.33
Col20a1Q923P0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.13■□□□□ 0.33
Col20a1Q923P0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col20a1Q923P0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col20a1Q923P0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Gm7488-201ENSMUST00000117148 684 ntBASIC17.12■□□□□ 0.33
Col20a1Q923P0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Gm29667-201ENSMUST00000190817 490 ntBASIC17.12■□□□□ 0.33
Col20a1Q923P0 Gm44855-201ENSMUST00000205725 362 ntBASIC17.12■□□□□ 0.33
Col20a1Q923P0 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.12■□□□□ 0.33
Col20a1Q923P0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col20a1Q923P0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col20a1Q923P0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col20a1Q923P0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.11■□□□□ 0.33
Col20a1Q923P0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col20a1Q923P0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.1■□□□□ 0.33
Col20a1Q923P0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Gm12882-201ENSMUST00000121696 517 ntBASIC17.1■□□□□ 0.33
Col20a1Q923P0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col20a1Q923P0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Col20a1Q923P0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms