Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3b3Q921M3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3b3Q921M3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sf3b3Q921M3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3b3Q921M3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3b3Q921M3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3b3Q921M3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.38■□□□□ 0.37
Sf3b3Q921M3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Gm9002-201ENSMUST00000178437 499 ntBASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3b3Q921M3 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Gm15240-201ENSMUST00000118156 720 ntBASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Gm13829-201ENSMUST00000119600 138 ntBASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Gm28911-201ENSMUST00000188837 117 ntBASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Gm5425-201ENSMUST00000214125 459 ntBASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Gm17795-201ENSMUST00000214505 757 ntBASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sf3b3Q921M3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Gm17150-201ENSMUST00000165577 381 ntBASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Gm5035-201ENSMUST00000215581 927 ntBASIC17.36■□□□□ 0.37
Sf3b3Q921M3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sf3b3Q921M3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3b3Q921M3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3b3Q921M3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3b3Q921M3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3b3Q921M3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sf3b3Q921M3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.35■□□□□ 0.37
Sf3b3Q921M3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sf3b3Q921M3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms