Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Gm16026-204ENSMUST00000162652 683 ntBASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhga4Q91XY4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Pcdhga4Q91XY4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga4Q91XY4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Pcdhga4Q91XY4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Pcdhga4Q91XY4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga4Q91XY4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhga4Q91XY4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Celf4-206ENSMUST00000224553 1729 ntBASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga4Q91XY4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms