Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Gm16198-201ENSMUST00000118766 670 ntBASIC12.19□□□□□ -0.46
H1fooQ8VIK3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Gm5177-201ENSMUST00000183092 997 ntBASIC12.19□□□□□ -0.46
H1fooQ8VIK3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Psmb5-202ENSMUST00000227257 622 ntBASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H1fooQ8VIK3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Gm8749-201ENSMUST00000117737 331 ntBASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Gm16026-204ENSMUST00000162652 683 ntBASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H1fooQ8VIK3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms