Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vps39Q8R5L3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
Vps39Q8R5L3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps39Q8R5L3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Vps39Q8R5L3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Gm16026-204ENSMUST00000162652 683 ntBASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps39Q8R5L3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Gm18733-201ENSMUST00000173950 856 ntBASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vps39Q8R5L3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Gm13597-201ENSMUST00000121239 375 ntBASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Thap2-203ENSMUST00000218989 527 ntBASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps39Q8R5L3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms