Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp7Q8R1T1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Gm12138-201ENSMUST00000122180 951 ntBASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Gm45384-201ENSMUST00000210451 277 ntBASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Gm9908-201ENSMUST00000211534 448 ntBASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp7Q8R1T1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Gm11478-201ENSMUST00000117851 599 ntBASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Gm15460-201ENSMUST00000118147 391 ntBASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC18.53■□□□□ 0.56
Chmp7Q8R1T1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp7Q8R1T1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp7Q8R1T1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp7Q8R1T1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp7Q8R1T1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp7Q8R1T1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Chmp7Q8R1T1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Chmp7Q8R1T1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp7Q8R1T1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp7Q8R1T1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms