Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Mir1895-201ENSMUST00000122615 79 ntBASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rfwd3Q8CIK8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Gm14822-201ENSMUST00000122247 291 ntBASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Gm27702-201ENSMUST00000184512 56 ntBASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rfwd3Q8CIK8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Gm8749-201ENSMUST00000117737 331 ntBASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Gm6736-201ENSMUST00000166583 948 ntBASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfwd3Q8CIK8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms