Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm44492-201ENSMUST00000197012 141 ntBASIC14.68□□□□□ -0.06
Clip4Q8CI96 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Clip4Q8CI96 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.68□□□□□ -0.06
Clip4Q8CI96 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.68□□□□□ -0.06
Clip4Q8CI96 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Clip4Q8CI96 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Gm12008-201ENSMUST00000117791 755 ntBASIC14.67□□□□□ -0.06
Clip4Q8CI96 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Gm27702-201ENSMUST00000184512 56 ntBASIC14.67□□□□□ -0.06
Clip4Q8CI96 Gm27397-201ENSMUST00000184997 107 ntBASIC14.67□□□□□ -0.06
Clip4Q8CI96 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.67□□□□□ -0.06
Clip4Q8CI96 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clip4Q8CI96 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.66□□□□□ -0.06
Clip4Q8CI96 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.66□□□□□ -0.06
Clip4Q8CI96 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Gm6736-201ENSMUST00000166583 948 ntBASIC14.66□□□□□ -0.06
Clip4Q8CI96 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.66□□□□□ -0.06
Clip4Q8CI96 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.66□□□□□ -0.06
Clip4Q8CI96 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.66□□□□□ -0.06
Clip4Q8CI96 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clip4Q8CI96 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Gm45747-201ENSMUST00000212203 999 ntBASIC14.65□□□□□ -0.06
Clip4Q8CI96 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clip4Q8CI96 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms