Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28bQ8CEG5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc28bQ8CEG5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Gm25925-201ENSMUST00000158314 306 ntBASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc28bQ8CEG5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Gm18489-201ENSMUST00000172565 551 ntBASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms