Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Gm23634-201ENSMUST00000175071 91 ntBASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc90bQ8C3X2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.08□□□□□ -0.15
Ccdc90bQ8C3X2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 AA414768-201ENSMUST00000121924 1257 ntBASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc90bQ8C3X2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc90bQ8C3X2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms