Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Gm13823-201ENSMUST00000119930 345 ntBASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Gm18766-201ENSMUST00000189811 808 ntBASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Gm5312-201ENSMUST00000203728 547 ntBASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp44Q8C2S0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp44Q8C2S0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp44Q8C2S0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp44Q8C2S0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.02■□□□□ 0.31
Usp44Q8C2S0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp44Q8C2S0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp44Q8C2S0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Gm26308-201ENSMUST00000157768 69 ntBASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp44Q8C2S0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Ssr1-204ENSMUST00000225319 1610 ntBASIC17■□□□□ 0.31
Usp44Q8C2S0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Usp44Q8C2S0 Gm9824-201ENSMUST00000178707 561 ntBASIC17■□□□□ 0.31
Usp44Q8C2S0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17■□□□□ 0.31
Usp44Q8C2S0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Usp44Q8C2S0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp44Q8C2S0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp44Q8C2S0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Gm45760-201ENSMUST00000212190 1782 ntBASIC17■□□□□ 0.31
Usp44Q8C2S0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp44Q8C2S0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp44Q8C2S0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms