Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Gm9726-201ENSMUST00000180321 678 ntBASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Gm17971-201ENSMUST00000190239 806 ntBASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim4Q8C1Q6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gm13036-201ENSMUST00000117799 748 ntBASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smim4Q8C1Q6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Gm5864-201ENSMUST00000202263 970 ntBASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Gm18195-201ENSMUST00000207604 706 ntBASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smim4Q8C1Q6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms