Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Gm9682-201ENSMUST00000197505 556 ntBASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf7Q8BTV2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Rps4l-201ENSMUST00000071745 943 ntBASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf7Q8BTV2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Gm43514-201ENSMUST00000198852 424 ntBASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf7Q8BTV2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf7Q8BTV2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms