Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Gm18195-201ENSMUST00000207604 706 ntBASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cpne3Q8BT60 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Gm12008-201ENSMUST00000117791 755 ntBASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Gm27628-201ENSMUST00000184911 107 ntBASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.06□□□□□ -0.16
Cpne3Q8BT60 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cpne3Q8BT60 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Gm23547-201ENSMUST00000158210 271 ntBASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Mir5126-201ENSMUST00000175513 77 ntBASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Gm27300-201ENSMUST00000184085 97 ntBASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Gm27335-201ENSMUST00000184758 97 ntBASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cpne3Q8BT60 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms