Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Gm27397-201ENSMUST00000184997 107 ntBASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Gm43575-201ENSMUST00000196420 516 ntBASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Gm24513-201ENSMUST00000174964 138 ntBASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpsf4Q8BQZ5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gm23935-201ENSMUST00000102303 57 ntBASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gm24270-201ENSMUST00000102326 57 ntBASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gm12008-201ENSMUST00000117791 755 ntBASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gm24245-201ENSMUST00000157318 57 ntBASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Thap2-203ENSMUST00000218989 527 ntBASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpsf4Q8BQZ5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms