Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Gm43474-201ENSMUST00000196415 774 ntBASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Gm43125-201ENSMUST00000201724 730 ntBASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Gm20553-201ENSMUST00000204205 844 ntBASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rab11fip4Q8BQP8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip4Q8BQP8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip4Q8BQP8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms