Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Gm15467-201ENSMUST00000120582 445 ntBASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Clrn3Q8BHH8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Mir3113-201ENSMUST00000175478 76 ntBASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.67□□□□□ -0.22
Clrn3Q8BHH8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Gm16026-204ENSMUST00000162652 683 ntBASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clrn3Q8BHH8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms