Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lrsam1Q80ZI6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 AV026068-213ENSMUST00000223675 1171 ntBASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrsam1Q80ZI6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Carlr-201ENSMUST00000181515 2574 ntBASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Gm27628-201ENSMUST00000184911 107 ntBASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.81■□□□□ 0.12
Lrsam1Q80ZI6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Gm13418-201ENSMUST00000119097 944 ntBASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.8■□□□□ 0.12
Lrsam1Q80ZI6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms