Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Gm6912-201ENSMUST00000117218 544 ntBASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Shd-206ENSMUST00000225145 998 ntBASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sh3tc2Q80VA5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3tc2Q80VA5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3tc2Q80VA5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3tc2Q80VA5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Sh3tc2Q80VA5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sh3tc2Q80VA5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.83■□□□□ 0.13
Sh3tc2Q80VA5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Gm9719-201ENSMUST00000162765 543 ntBASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Gm25857-201ENSMUST00000082788 129 ntBASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sh3tc2Q80VA5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Gm6180-201ENSMUST00000065243 498 ntBASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sh3tc2Q80VA5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms