Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim62Q80V85 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim62Q80V85 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim62Q80V85 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trim62Q80V85 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.04■□□□□ -0
Trim62Q80V85 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.04■□□□□ -0
Trim62Q80V85 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim62Q80V85 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trim62Q80V85 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.04■□□□□ -0
Trim62Q80V85 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.04■□□□□ -0
Trim62Q80V85 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim62Q80V85 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim62Q80V85 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim62Q80V85 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.03■□□□□ -0
Trim62Q80V85 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim62Q80V85 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim62Q80V85 Gm15693-201ENSMUST00000120470 637 ntBASIC15.03■□□□□ -0
Trim62Q80V85 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Trim62Q80V85 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.03■□□□□ -0
Trim62Q80V85 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.03■□□□□ -0
Trim62Q80V85 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.03■□□□□ -0
Trim62Q80V85 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim62Q80V85 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim62Q80V85 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim62Q80V85 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim62Q80V85 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Trim62Q80V85 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.02■□□□□ -0
Trim62Q80V85 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm13015-201ENSMUST00000118674 204 ntBASIC15.02■□□□□ -0
Trim62Q80V85 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Trim62Q80V85 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.02■□□□□ -0
Trim62Q80V85 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim62Q80V85 Gm29310-201ENSMUST00000185468 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21825-201ENSMUST00000185728 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm29109-201ENSMUST00000185895 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21896-201ENSMUST00000186520 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21873-201ENSMUST00000186728 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21794-201ENSMUST00000187056 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21880-201ENSMUST00000187275 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21826-201ENSMUST00000187451 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21198-201ENSMUST00000188393 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21749-201ENSMUST00000189343 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21901-201ENSMUST00000189568 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm29424-201ENSMUST00000189716 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm28599-201ENSMUST00000189838 694 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21867-201ENSMUST00000189917 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm29269-201ENSMUST00000190087 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21722-201ENSMUST00000190153 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm28423-201ENSMUST00000190701 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21899-201ENSMUST00000190745 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21910-201ENSMUST00000191163 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21849-201ENSMUST00000191571 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm28678-201ENSMUST00000191593 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm20910-201ENSMUST00000193268 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Gm21871-201ENSMUST00000194621 696 ntBASIC15.02■□□□□ -0
Trim62Q80V85 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim62Q80V85 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim62Q80V85 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim62Q80V85 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim62Q80V85 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim62Q80V85 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Trim62Q80V85 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim62Q80V85 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms