Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdh19Q80TF3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh19Q80TF3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Olfr286-202ENSMUST00000205305 969 ntBASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh19Q80TF3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Gm24543-201ENSMUST00000103867 82 ntBASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Gm13223-201ENSMUST00000118609 747 ntBASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh19Q80TF3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Gm6222-201ENSMUST00000120787 396 ntBASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Mir8102-201ENSMUST00000184148 139 ntBASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh19Q80TF3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh19Q80TF3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms