Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vma21Q78T54 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vma21Q78T54 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vma21Q78T54 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vma21Q78T54 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vma21Q78T54 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vma21Q78T54 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Gm45167-201ENSMUST00000208007 322 ntBASIC11.86□□□□□ -0.51
Vma21Q78T54 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.86□□□□□ -0.51
Vma21Q78T54 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vma21Q78T54 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Vma21Q78T54 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vma21Q78T54 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.84□□□□□ -0.51
Vma21Q78T54 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vma21Q78T54 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms